School personnel information

写真b

SHIMIZU Hiroshi


Keyword

metabolic engineering, biosystem analysis, bioinformatics

URL

http://www-shimizu.ist.osaka-u.ac.jp/index.html

To the head of this page.▲

Organization 【 display / non-display 】

  • 1998.04.01 - 2002.03.31, Graduate School of Engineering, Associate Professor, full time

  • 2002.04.01 - 2003.03.31, Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Associate Professor, full time

  • 2003.04.01 - , Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Professor, full time

To the head of this page.▲

Education 【 display / non-display 】

Doshisha University Faculty of Engineering  Graduated 1984.03
Kyoto University Graduate School, Division of Engineering  Completed 1986.03
Kyoto University Graduate School, Division of Engineering  Accomplished credits for doctoral program 1989.03
To the head of this page.▲

Employment Record 【 display / non-display 】

Assistant Professor, Osaka University 1990.04 -
Associate Professor, Osaka University 1995.04 -
visiting engineer, MIT 1996.06 - 1997.06
Professor, Osaka University 2003.04 -
To the head of this page.▲

Research topics 【 display / non-display 】

  • metabolic enginnering, biosystems analysis, bioinformatics
    Applied microbiology, Biofunction/ Bioprocess

To the head of this page.▲

Academic Society Membership 【 display / non-display 】

  • Molecular Biology Society of Japan

To the head of this page.▲
 

Academic Papers 【 display / non-display 】

  • In silico screening of triple reaction knockout Escherichia coli strains for overproduction of useful metabolites, Satoshi Ohno, Chikara Furusawa, Hiroshi Shimizu, Journal of Bioscience and Bioengineering, in press, 2012.09, Papers

  • Systems Metabolic Engineering: The Creation of Microbial Cell Factories by Rational Metabolic Design and Evolution, Chikara Furusawa, Takaaki Horinouchi, Takashi Hirasawa, Hiroshi Shimizu, Advances in Biochemical Engineering/Biotechnology, 1-23, 2012.06, Review Papers

  • Investigating the effects of perturbations to pgi and eno gene expression on central carbon metabolism in Escherichia coli using 13C metabolic flux analysis, Yuki Usui, Takashi Hirasawa, Chikara Furusawa, Tomokazu Shirai, Natsuko Yamamoto, Hirotada Mori, Hiroshi Shimizu, Microbial Cell Factories, 11(1), 87, 2012.06, Papers

  • An in silico platform for the design of heterologous pathways in nonnative metabolite production, Sunisa Chatsurachai, Chikara Furusawa, Hiroshi Shimizu, BMC Bioinformatics , 13(1), 93, 2012.05, Papers

  • Understanding the mechanism of heat stress tolerance caused by high trehalose accumulation in Saccharomyces cerevisiae using DNA microarray, Siraje Arif Mahmud, Takashi Hirasawa, Chikara Furusawa, Katsunori Yoshikawa, Hiroshi Shimizu, Journal of Bioscience and Bioengineering, 113(4), 526-528, 2012.04, Papers

display all >>

To the head of this page.▲

Books 【 display / non-display 】

  • Textbook, Genetic Engineering, Chapter 12, Hiroshi Shimizu, 2012.03

  • Special, Hand Book of Biotechnology, Hiroshi Shimizu, 2005.06

  • Special, Analysis of responses of complex bionetworks to changes in environmental conditions, Lecture Note Series of Computer Science, Vol. 3141, Biologically Inspired Approaches to Advanced Information Technology, Hiroshi Shimizu, Takashi Hirasawa, Keisuke Nagahisa, Suteaki Shioya, Springer, 2004.10

  • Textbook, Advances in Biochemical Production Technologies, Hiroshi Shimizu, Hisaya Tanaka, Akinori Nakato, Keisuke Nagahisa, and Suteaki Shioya, Oxford University Press, 2002.09

  • Special, Mehothod in Biotechnology, Suteaki Shioya and Hiroshi Shimizu, Humana Press, 2001.01

display all >>

To the head of this page.▲

Awards 【 display / non-display 】

  • Asia Pacific Bioinformatics Network Best Poster Award"De novo Pathway Design Platform for Exploring Biosynthetic Capacity in Genome Scale Model of Microorganisms as Cell Factories", Sunisa Chatsurachai, Chikara Furusawa, Hiroshi Shimizu, International Conference on Bioinformatics (InCoB), 2010.09

To the head of this page.▲