School personnel information

写真b

MATSUDA Hideo


Keyword

Genome Information Engineering

URL

http://www-mats.ist.osaka-u.ac.jp/~matsuda/

Organization 【 display / non-display

  • 1997.04.01 - 2002.03.31, Graduate School of Engineering Science, Associate Professor

  • 2002.04.01 - , Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Professor

Education 【 display / non-display

Kobe University Faculty of Science  Graduated 1982.03
Kobe University Graduate School, Division of Engineering  Completed 1984.03
Kobe University Graduate School, Division of Science and Technology  Completed 1987.03

Employment Record 【 display / non-display

Research Associate, Kobe University 1987.04 - 1990.01
Lecturer, Kobe University 1990.02 - 1994.03
Associate Professor, Kobe University 1994.04 - 1994.09
Associate Professor, Osaka University 1994.10 - 2002.03

Research topics 【 display / non-display

  • Bioinformatics
    Life, health and medical informatics-related

  • Genome Information Engineering
    Genome biology-related

Academic Society Membership 【 display / non-display

  • Japanese Society for Bioinformatics

  • International Society for Computational Biology

  • ACM

  • IEEE CS

 

Academic Papers 【 display / non-display

  • Detection of Fusion Genes from Human Breast Cancer Cell-Line RNA-Seq Data Using Shifted Short Read Clustering, Yoshiaki Sota, Shigeto Seno, Hironori Shigeta, Naoki Osato, Masafumi Shimoda, Shinzaburo Noguchi, Hideo Matsuda, IEEE 18th International Conference on Bioinformatics and Bioengineering (BIBE), 159-162, 2018.10, International Conference(Proceedings)

  • The dipeptidyl peptidase-4 (DPP-4) inhibitor teneligliptin enhances brown adipose tissue function, thereby preventing obesity in mice, Kenichiro Takeda, Honami Sawazaki, Haruya Takahashi, Yu-Sheng Yeh, Huei-Fen Jheng, Wataru Nomura, Takeshi Ara, Nobuyuki Takahashi, Shigeto Seno, Naoki Osato, Hideo Matsuda, Teruo Kawada, Tsuyoshi Goto, FEBS Open Bio,8(11) 1782-1793, 2018.09, Papers

  • Automated transition analysis of activated gene regulation during diauxic nutrient shift in Escherichia coli and adipocyte differentiation in mouse cells, Yoichi Takenaka, Kazuma Mikami, Shigeto Seno, Hideo Matsuda, BMC Bioinformatics,19(Suppl.4)(89) 49-59, 2018.05, Papers

  • Roles of Enhancer RNAs in RANKL-induced Osteoclast Differentiation Identified by Genome-wide Cap-analysis of Gene Expression using CRISPR/Cas9, Yukako Sakaguchi, Keizo Nishikawa, Shigeto Seno, Hideo Matsuda, Hiroshi Takayanagi, Masaru Ishii, Scientific Reports,8(1), 2018.05, Papers

  • Chromatin 3D reconstruction from chromosomal contacts using a genetic algorithm, Viacheslav Kapilevich, Shigeto Seno, Hideo Matsuda, Yoichi Takenaka, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2018.03, Papers

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Books 【 display / non-display

  • Special, Genome Informatics Vol.12, Hideo Matsuda, Satoru Miyano, Toshihisa Takagi, Limsoon Wong, Universal Academy Press, 2001.12

Awards 【 display / non-display

  • IPSJ Outstanding Paper Award, Tomoshige Ohno, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda, Information Processing Society of Japan, 2014.06

  • APBC2012 Best Paper Award, Yukito Watanabe, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda, The 10th Asia Pacific Bioinformatics Conference (APBC2012), 2012.01

  • GIW2010 Best Poster Award, Tomoshige Ohno, Motokazu Ishikawa, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda, The 21st International Conference on Genome Informatics (GIW2010), 2010.12

  • Forum on Information Technology Paper Award, Kohei Taki, Reiji Teramoto, Yoichi Takenaka, Hideo Matsuda, Forum on Information Technology, 2004.09

 

Conference management 【 display / non-display

  • International Conference, IEEE 16th International Conference on Bioinformatics and BioEngineering (IEEE BIBE 2016), Program Co-Chair, 2016.10

  • National Conference, Bioimage Informatics Workshop 2016, Organizer, 2016.06

Outside Activity Management 【 display / non-display

  • Public Corporation, Research Center for Science Systems, Japan Society for the Promotion of Science, Program Officer, 2016.04 -

  • Academic society, Japanese Society for Bioinformatics, Board of Director, 2015.04 - 2017.03

  • Academic society, Asia-Pacific Bioinformatics Network, Executive Committee Member, 2014.08 - 2016.08

  • Academic society, Japanese Society for Bioinformatics, President, 2011.12 - 2013.03

  • Academic society, Japanese Society for Bioinformatics, President, 2010.04 - 2011.12

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